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Academic Member

Assistant Professor Aslı Kutlu

Moleküler Biyoloji ve Genetik
Aslı Kutlu completed her undergraduate studies at the Department of Chemical and Biological Engineering at Koç University in 2012. In 2012, she started her Ph.D. studies at the Department of Molecular Biology, Genetics and Bioengineering. Sabancı University under the supervision of Prof. Uğur Sezerman. Her research studies are about protein engineering for industrial applications. After receiving her Ph.D. in 2017, she worked as a post-doctoral fellow at Acıbadem Mehmet Aydınlar University, Department of Medical Statistics and Bioinformatics, School of Medicine, where she joined the Sezerman l...
Aslı Kutlu completed her undergraduate studies at the Department of Chemical and Biological Engineering at Koç University in 2012. In 2012, she started her Ph.D. studies at the Department of Molecular Biology, Genetics and Bioengineering. Sabancı University under the supervision of Prof. Uğur Sezerman. Her research studies are about protein engineering for industrial applications. After receiving her Ph.D. in 2017, she worked as a post-doctoral fellow at Acıbadem Mehmet Aydınlar University, Department of Medical Statistics and Bioinformatics, School of Medicine, where she joined the Sezerman lab again. During the postdoctoral fellowship, she mainly focused on studying the mechanism of rare diseases through molecular dynamics (MD) studies to elucidate the role of novel mutations. Between February 2019 and August 2020, she worked at Biruni University as an assistant professor. In September 2020, she joined the ISU Department of Molecular Biology and Genetics as a PI in the field of molecular cancer research and rare disease mechanism through experimental and computational approaches.

Articles

  • Evaluation of Anticancer Activity of Novel Sulfanyl-Substituted Hydrazone Compounds in Hepatocellular Carcinoma: In Vitro, In Silico, and In Ovo Studies ,2026
  • A possible founder mutation in FZD6 gene in a Turkish family with autosomal recessive nail dysplasia ,2019
  • TNFRSF13B VARIANTS ACT AS MODIFIERS TO CLINICAL PHENOTYPES IN COMMON VARIABLE IMMUNE DEFICIENCY DISORDERS ,2023
  • Contributing to the Functional Classification of Missense Variants in RAG1 Protein from Structural Perspective ,2025
  • Fc–FcγRI Complexes: Molecular Dynamics Simulations Shed Light on Ectodomain D3′s Potential Role in IgG Binding ,2024
  • Elucidating the roles of naturally occurring silent mutations in Polycystic Ovary Syndrome (PCOS) ,2020
  • Understanding the impacts of self-shuffling approach on structure and function of shuffled endoglucanase enzyme via MD simulations ,2020
  • Repurposing Fc gamma receptor I (FcγRI, CD64) for site-oriented monoclonal antibody capture: A proof-of-concept study for real-time detection of tumor necrosis factor-alpha (TNF -α) ,2023
  • Identifying and elucidating the roles of Y198N and Y204F mutations in the PAH enzyme through molecular dynamic simulations ,2021
  • Identification of key genes and pathways for cholangiocarcinoma using an integrated bioinformatics analysis ,2022
  • Discussing the roles of proline and glycine from the perspective of cold adaptation in lipases and cellulases ,2022
  • Computational analysis of missense filamin-A variants, including the novel p.Arg484Gln variant of two brothers with periventricular nodular heterotopia. ,2022
  • Enhancing Enzymatic Properties of Endoglucanase I Enzyme from Trichoderma Reesei via Swapping from Cellobiohydrolase I Enzyme ,2019
  • Performing the comparative analysis to understand the functional roles of genes in different pathways of cardiomyopathy disease ,2021
  • A possible founder mutation in FZD6 gene in a Turkish family with autosomal recessive nail dysplasia ,2019
  • Investigating the structural properties of the active conformation BTL2 of a lipase from Geobacillus thermocatenulatus in toluene using molecular dynamic simulations and engineering BTL2 via in-silico mutation ,2018
  • Enhancing Enzymatic Properties of Endoglucanase I Enzyme from Trichoderma Reesei via Swapping from Cellobiohydrolase I Enzyme ,2019
  • Desing and characterization of two novel cellulases through single gene shuffling of Cel12A (EG3) gene from Trichoderma reesei ,2016

Reports

  • Explaining the Different Forms of Primer Immunodeficiency (PID) Caused by Missense Variants in RAG1 Gene from Structural Perspective - Işıkgil Begüm, FIRTINA SİNEM, KUTLU ASLI
  • MASP2 geninde meydana gelen sessiz varyantların biyoinformatik analizi - Işıkgil Begüm, FIRTINA SİNEM, KUTLU ASLI
  • Exploring more about the role of Glycine residues into the cold adaptation mechanism of CAL-B lipases fromCandida antarctica and Cel5G cellulase from Pseudoalteromonas haloplanktisvia Molecular Dynamics Simulation - KUTLU ASLI,Öztaşa Nalan,Hakimy Sevil,Şahin Hande Betül,Yaşar Yaren Reyhan,Çelebi Rümeysa Emine,Hacısadıkoğlu Esin
  • Hydrogen Bond Fingerprints: Revealing the Complexities of Protein Function - ÇETİN EBRU, BERKSÖZ MELİKE, KUTLU ASLI, ATILGAN CANAN, ATILGAN ALİ RANA
  • Modeling Structural Properties and Thermostability of the Active Conformation of Lipase from Geobacillus Thermocatenulatus, BTL2, in Organic Solvent. - KUTLU ASLI,Venturini Alessandro,BURDUROĞLU HÜSEYİN CAHİT,SEZERMAN OSMAN UĞUR
  • Yaygın Değişken İmmün Yetersizliklerde Tüm Genom Metilasyon Değişimlerinin İncelenmesi - Işıkgil Begüm,BİLGİÇ ELTAN SEVGİ,ERBİLGİN YÜCEL,KUTLU ASLI,GEMİCİ KARAASLAN HATİCE BETÜL,ÖZEK ESRA,KIYKIM AYÇA,YILMAZ AYDOĞAN HÜLYA,BARIŞ SAFA,AYDINER ELİF,AR MUHLİS CEM,ÖZEN AHMET OĞUZHAN,SAYİTOĞLU MÜGE,FIRTINA SİNEM
  • Generation of novel cellulases and lipases for industrial applications through DNA shuffling and molecular dynamic simulations - KUTLU ASLI, SEZERMAN OSMAN UĞUR
  • How To Use Big Data In Health Informatics For Discovery Of Diagnostics and Prognostic Biomarkers In Cancer? - Arda Merve, ATAK EVREN, KUTLU ASLI
  • How To Utilize Gene Expression Omnibus (GEO) Data Sets In Pathway-Based Biomarker Studies: Cholangiocarcinoma Case - Arda Merve, KUTLU ASLI, ATAK EVREN, ULUKAYA ENGİN
  • Head and Neck cancer: performing functional gene enrichment and clustering study to discover the new potentials as biomarker - Atak Evren,Öten Ahmet Melih,İRİGÜL SÖNMEZ ÖYKÜ,YENENLER ASLI
  • Database application on cardiomyopathy - YENENLER ASLI,Serttürk Seda
  • Using a decision tree meta-predictor and accelerated molecular dynamics method together to predict the functional impacts of variants - Gerlevik Umut, Yenenler Aslı, Ülgen Ege, Sezerman Osman Uğur
  • Kolanjiokarsinomda secili genlerin potansiyel biyobelirtec rollerinin hesaplamali yaklasimla yeniden gozden gecirilmesi - KUTLU ASLI
  • Probing for potential genes as novel biomarkers in head-and-neck cancer: prognostic and diagnostic approach - ATAK EVREN, KUTLU ASLI
  • Probing The Structural Impacts Of Arg388 Replacements In Pkp2 Protein Complex: Spesıfıc Case In Arvc - KUTLU ASLI, Sahin Şuara, Özkan Mehmet Emre, ULUKAYA ENGİN
  • Bioinformatics Approach Of The Effect Of Radıochemotherapy Treatment On Gene Expression - ATAK EVREN, ULUKAYA ENGİN, KUTLU ASLI
  • Revealing the structural impacts of point mutations on MeCP2 protein associated with Rett Syndrome via MD Simulations - Öten Ahmet Melih, KUTLU ASLI
  • Head-and-neck cancer: performin functional gene enrichment and clustering study to discover the new potentials as biomarker - Atak Evren, Öten Ahmet Melih, İRİGÜL SÖNMEZ ÖYKÜ, KUTLU ASLI
  • SCRAPIE RELATED MUTATIONSANALYSES OF SHEEP PRION PROTEIN VIA MOLECULAR DYNAMICS SIMULATIONS - Uyar Meryem Sinem, Öten Ahmet Melih, Erdoğan İlayda, İRİGÜL SÖNMEZ ÖYKÜ, KUTLU ASLI
  • Analysis of Cold-Adaptive Lipases with Molecular Dynamics Simulations - Erdoğan İlayda, Öten Ahmet Melih, KUTLU ASLI
  • The investigation of activation mechanism of BTL2 in non-aqueous solvents - KUTLU ASLI, SEZERMAN OSMAN UĞUR
  • Generation of cellulases for industrial applications through DNA shuffling - KUTLU ASLI, SEZERMAN OSMAN UĞUR
  • An attempt to improve the accuracy of mutation impact prediction through molecular dynamics studies - Gerlevik Umut, KUTLU ASLI, SEZERMAN OSMAN UĞUR
  • An attempt to identify the potential biomarkers in the Bladder Cancer via functional gene-enrichment approach - elbeyoğlu şeyma, Öten Ahmet Melih, Atak Evren, özgürses mete emir, İRİGÜL SÖNMEZ ÖYKÜ, KUTLU ASLI
  • Head-and-neck cancer: Performing functional gene enrichment study to discover the new potentials as biomarkers - Atak Evren, Öten Ahmet Melih, elbeyoğlu şeyma, özgürses mete emir, İRİGÜL SÖNMEZ ÖYKÜ, KUTLU ASLI
  • Gene enrichment analysis to elucidate the role of mitochondrial genes in prostate cancer - özgürses mete emir, Öten Ahmet Melih, İRİGÜL SÖNMEZ ÖYKÜ, KUTLU ASLI
  • PRaMP: An attempt to improve the accuracy of mutation impact prediction through molecular dynamics studies - YENENLER ASLI,Gerlevik Umut,Ülgen Ege,sezerman osman uğur
  • PRaMP: An attempt to improve the accuracy of mutation impact prediction through molecular dynamics studies - YENENLER ASLI,Gerlevik Umut,Ülgen Ege,sezerman osman uğur
  • PRaMP: An attempt to improve the accuracy of mutation impact prediction through molecular dynamics studies - YENENLER ASLI,Gerlevik Umut,Ülgen Ege,sezerman osman uğur
  • PRaMP: An attempt to improve the accuracy of mutation impact prediction through molecular dynamics studies - YENENLER ASLI,Gerlevik Umut,Ülgen Ege,sezerman osman uğur
  • PRaMP: An attempt to improve the accuracy of mutation impact prediction through molecular dynamics studies - YENENLER ASLI,Gerlevik Umut,Ülgen Ege,sezerman osman uğur
  • PRaMP: An attempt to improve the accuracy of mutation impact prediction through molecular dynamics studies - YENENLER ASLI,Gerlevik Umut,Ülgen Ege,sezerman osman uğur
  • PRaMP: An attempt to improve the accuracy of mutation impact prediction through molecular dynamics studies - YENENLER ASLI,Gerlevik Umut,Ülgen Ege,sezerman osman uğur
  • PRaMP: An attempt to improve the accuracy of mutation impact prediction through molecular dynamics studies - YENENLER ASLI,Gerlevik Umut,Ülgen Ege,sezerman osman uğur
  • PRaMP: An attempt to improve the accuracy of mutation impact prediction through molecular dynamics studies - YENENLER ASLI,Gerlevik Umut,Ülgen Ege,sezerman osman uğur
  • PRaMP: An attempt to improve the accuracy of mutation impact prediction through molecular dynamics studies - YENENLER ASLI,Gerlevik Umut,Ülgen Ege,sezerman osman uğur
  • PRaMP: An attempt to improve the accuracy of mutation impact prediction through molecular dynamics studies - YENENLER ASLI,Gerlevik Umut,Ülgen Ege,sezerman osman uğur
  • PRaMP: An attempt to improve the accuracy of mutation impact prediction through molecular dynamics studies - YENENLER ASLI,Gerlevik Umut,Ülgen Ege,sezerman osman uğur
  • PRaMP: An attempt to improve the accuracy of mutation impact prediction through molecular dynamics studies - YENENLER ASLI,Gerlevik Umut,Ülgen Ege,sezerman osman uğur
  • PRaMP: An attempt to improve the accuracy of mutation impact prediction through molecular dynamics studies - YENENLER ASLI,Gerlevik Umut,Ülgen Ege,sezerman osman uğur
  • Head and Neck cancer: performing functional gene enrichment and clustering study to discover the new potentials as biomarker - Atak Evren,Öten Ahmet Melih,İRİGÜL SÖNMEZ ÖYKÜ,YENENLER ASLI
  • Database application on cardiomyopathy - YENENLER ASLI,Serttürk Seda

Books

  • Lippincott’s Illustrated Reviews: Biochemistry, Eighth Edition – Nobel Tıp
  • Lippincott’s Illustrated Reviews: Biochemistry, Eighth Edition – Nobel Tıp
  • Metabolic Syndrome: A compherensive update with new insights – Bentham Books
  • Moleküler Biyoloji Güncel Araştırma Teknikleri – Ema Tıp Kitabevi
  • TÜM YÖNLERİYLE DİL VE KONUŞMA BOZUKLUKLARINDA DEĞERLENDİRME – AKADEMİSYEN YAYINEVİ
Assistant Professor Aslı Kutlu - İstinye Üniversitesi
asli.kutluistinye.edu.tr

Research Areas

  • Fen Bilimleri ve Matematik Temel Alanı
  • Moleküler Biyoloji ve Genetik

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